The detailed information of tRNA gene sequence


Sequence ID>WENV170008657
Genome IDAOMQ01014871
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 96
End posion on genome 5
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatcagcaat
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTTTATTGCGCCGGTCTCGAAAACCGGAAGCCACGGTATCGTG
GTTCGAGAGTTCGAATCTCTCCGCTTCCTCCA
Downstream region at tRNA end position 
atttnnnnnn
Secondary structure (Cloverleaf model)
>WENV170008657	Ser	CGA
                   t      TCCA atttnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G       + | | |                 T T
    T       T T G C
      T T A        G     AAGCCACGGTATCGTGGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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