The detailed information of tRNA gene sequence


Sequence ID>WENV170008811
Genome IDAPHM01007748
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 1432
End posion on genome 1344
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GTTGCGGTAGCCAAGCTTGGCCCAAGGCGCAGGGTTGCTAACTCTGTGGCGTAATTGCCT
CCGGGGTTCGAATCCCCGCCGCAACGTCA
Downstream region at tRNA end position 
gcagaacgcg
Secondary structure (Cloverleaf model)
>WENV170008811	Ser	GCT
                   n      GTCA gcagaacgcg
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    T C G A        A      | | | | |     G
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGTAATTGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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