The detailed information of tRNA gene sequence


Sequence ID>WENV170008848
Genome IDAPHM01010156
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 854
End posion on genome 766
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtacgcgC
tRNA gene sequence 
GTCGTGGTAGCCAAGTCTGGCCCAAGGCGCAGGGTTGCTAACTCTGTGGCGTAATGCCTC
CGGGGTTCGAATCCCCGCCACGACGTCC
Downstream region at tRNA end position 
gagggcgccc
Secondary structure (Cloverleaf model)
>WENV170008848	Ser	GCT
                   C      GTCC gagggcgccc
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C T G A        A      | | | | |     G
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGTAATGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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