The detailed information of tRNA gene sequence


Sequence ID>WENV170008911
Genome IDAPHM01014962
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 1115
End posion on genome 1190
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atccattgtt
tRNA gene sequence 
AGCGGGGTGGAGCAGCCAGGAGTGCTCGTCGGGCTCATAACCCGGAGGTCCGTGGTTCAA
ATCCACGCTCCGCTACtc
Downstream region at tRNA end position 
tcctaagcta
Secondary structure (Cloverleaf model)
>WENV170008911	Met	CAT
                   t      ACtc tcctaagcta
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     G C A C C     A
    C C G A        G      | | | | |     A
  A         C G A G       C G T G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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