The detailed information of tRNA gene sequence


Sequence ID>ENV08001901
Genome IDABOJ01037529
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 77
End posion on genome 1
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttatattttc
tRNA gene sequence 
AGTCTCATAGCTCAGCTGGTTAGAGCGCTACACTGATAATGTAGAGGTCGGCAGTTCGAG
TCTGCCTGAGACTACAA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001901	Ile	GAT
                   c      ACAA nnnnnnnnnn
                     A - T
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     C C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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