The detailed information of tRNA gene sequence


Sequence ID>WENV170009108
Genome IDAPHM01021303
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 10064
End posion on genome 9979
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattgtttgt
tRNA gene sequence 
GCCGAGGTAGCCTAGCCCGGCCAAGGCGCCTGCTTCGAGAGCAGGTCTCCGAGAGGACTC
GTGAGTTCAAATCTCACCCTCGGCGCtc
Downstream region at tRNA end position 
gtctcgcgtt
Secondary structure (Cloverleaf model)
>WENV170009108	Ser	CGA
                   t      GCtc gtctcgcgtt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        A      | | | | |     A
  C         T C C G       G T G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TCTCCGAGAGGACTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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