The detailed information of tRNA gene sequence


Sequence ID>WENV170009272
Genome IDAPMI01000018
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 992151
End posion on genome 992240
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acataattac
tRNA gene sequence 
GGAGACTTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCAAGAGTTCGAATCTCTTAGTCTCCGCCA
Downstream region at tRNA end position 
gataaaatgg
Secondary structure (Cloverleaf model)
>WENV170009272	Ser	GGA
                   c      GCCA gataaaatgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A          T A
                    T     T T C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A A G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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