The detailed information of tRNA gene sequence


Sequence ID>WENV170009283
Genome IDAPMI01000022
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 44245
End posion on genome 44320
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttaggtgtat
tRNA gene sequence 
GCCGCTGTAGCTCAGTTGGTAGAGCGGCGCTTTCGTAAAGCGTAGGTCACCGGTTCAACC
CCGGTCAGCGGCTCCA
Downstream region at tRNA end position 
aggaacgtat
Secondary structure (Cloverleaf model)
>WENV170009283	Thr	CGT
                   t      TCCA aggaacgtat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          C C
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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