The detailed information of tRNA gene sequence


Sequence ID>WENV170009301
Genome IDAPMI01000062
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 174520
End posion on genome 174609
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcaaaaaaa
tRNA gene sequence 
GGAGAGTTGACAGAGTGGCAATGTGCCAGCCTGCTAAGCTTGGGCTGCCGTTAATACGGT
ACAAAGGTTCGACTCCTTTACTCTCCGCAA
Downstream region at tRNA end position 
tgtttggtac
Secondary structure (Cloverleaf model)
>WENV170009301	Ser	GCT
                   a      GCAA tgtttggtac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T C
                    T     T T T C C     A
        G A        G      | | | | |     G
      T     G A C A       A A A G G     C
      G       | | |                 T T
      G     A T G T
        C A        G     GGCTGCCGTTAATACGGTAC
                    C - G
                    C   T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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