The detailed information of tRNA gene sequence


Sequence ID>WENV170009311
Genome IDAPMI01000063
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 438889
End posion on genome 438798
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attttcggcc
tRNA gene sequence 
GGTGAGGTGGATGAGTGGCTGAAATCAGTAGTTTGCTAAACTGCCGTACGGGTAACTCTG
TACCGAGGGTTCGAATCCCTCCCTCACCGCAA
Downstream region at tRNA end position 
aagccagtgt
Secondary structure (Cloverleaf model)
>WENV170009311	Ser	GCT
                   c      GCAA aagccagtgt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         | | |                 T T
    C       A A T C
      T G A        A     CGTACGGGTAACTCTGTACC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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