The detailed information of tRNA gene sequence


Sequence ID>WENV170009328
Genome IDAPMI01000085
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 211512
End posion on genome 211437
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccaaccgt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCATCGGCTTTGCAAGCCGGGGGTCGGCGGTTCGAAC
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
ttcctcgctc
Secondary structure (Cloverleaf model)
>WENV170009328	Ala	TGC
                   t      ACCA ttcctcgctc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C A
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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