The detailed information of tRNA gene sequence


Sequence ID>WENV170009330
Genome IDAPMI01000097
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1312
End posion on genome 1236
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aggcgccagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGACGGTTTTGGGTACCGTAGGTCGAGAGTTCGAA
TCCCTCCGCCCCGACCA
Downstream region at tRNA end position 
tcttccattg
Secondary structure (Cloverleaf model)
>WENV170009330	Pro	TGG
                   t      ACCA tcttccattg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G A G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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