The detailed information of tRNA gene sequence


Sequence ID>WENV170009356
Genome IDAPMI01000104
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1286307
End posion on genome 1286233
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gcattggttt
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTAGCGTACACGTCTGGGGGGCGTGTGGTCGCAAGTTCGAA
TCTTGTCATCCCGACtg
Downstream region at tRNA end position 
gaatcaactg
Secondary structure (Cloverleaf model)
>WENV170009356	Pro	GGG
                   t      ACtg gaatcaactg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T T C     A
      C G A        A      + | | | |     G
    C       C G C G       G C A A G     C
    C       | | | +                 T T
    G       G C G T
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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