The detailed information of tRNA gene sequence


Sequence ID>WENV170009371
Genome IDAPMI01000105
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 145353
End posion on genome 145279
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccaataaac
tRNA gene sequence 
CGCGAGGTAGAGCAGCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCGAACC
CTATCCTCGCAACAA
Downstream region at tRNA end position 
caagaaacaa
Secondary structure (Cloverleaf model)
>WENV170009371	Met	CAT
                   c      ACAA caagaaacaa
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          C A
                    T     T A T C C     A
        G A        A      | | | | |     G
      C     C G A G       A T A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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