The detailed information of tRNA gene sequence


Sequence ID>WENV170009373
Genome IDAPMI01000107
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 576
End posion on genome 651
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcgactcaa
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCACCGGCTTTGCAAGCCGGGGGTCGTCGGTTCGATC
CCGACTGCCTCCACCA
Downstream region at tRNA end position 
gagagatcag
Secondary structure (Cloverleaf model)
>WENV170009373	Ala	TGC
                   a      ACCA gagagatcag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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