The detailed information of tRNA gene sequence


Sequence ID>WENV170009384
Genome IDAPMI01000139
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 345462
End posion on genome 345536
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccggaagtt
tRNA gene sequence 
CGGGAAGTAGCGCAGGCCGGTAGCGCATCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCTTCCCGACtt
Downstream region at tRNA end position 
aagaaagaaa
Secondary structure (Cloverleaf model)
>WENV170009384	Pro	TGG
                   t      ACtt aagaaagaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        A      + | | | |     G
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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