The detailed information of tRNA gene sequence


Sequence ID>WENV170009390
Genome IDAPMI01000144
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 87093
End posion on genome 87177
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aatctagtgt
tRNA gene sequence 
GCCTCTGTGGTGGAATTGGTAGACGCGCTCGACTCAAAATCGAGTACCGAGAGGTGTGCC
GGTTCGACTCCGGCCAGAGGCACCA
Downstream region at tRNA end position 
tttctttata
Secondary structure (Cloverleaf model)
>WENV170009390	Leu	CAA
                   t      ACCA tttctttata
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          T C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TACCGAGAGGTGT
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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