The detailed information of tRNA gene sequence


Sequence ID>WENV170009399
Genome IDAPMI01000163
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 37292
End posion on genome 37200
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atccttttct
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCACAACGGCGCCGACTCGAAATCGGATGGGGGTCTAACCAC
CCCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatcaacagg
Secondary structure (Cloverleaf model)
>WENV170009399	Ser	CGA
                   t      GCCA aatcaacagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A C A          C     TGGGGGTCTAACCACCCCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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