The detailed information of tRNA gene sequence


Sequence ID>WENV170009400
Genome IDAPMI01000163
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 26296
End posion on genome 26220
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gactgattgc
tRNA gene sequence 
AGCAGGGTGGAGCAGCCCGGTAGCTCGTCGGCCTCATAAGCCGAAGGTCGCAGGTTCAAA
TCCTGTCCTTGCTTCCA
Downstream region at tRNA end position 
acaaaaaacc
Secondary structure (Cloverleaf model)
>WENV170009400	Met	CAT
                   c      TCCA acaaaaaacc
                     A - T
                     G - C
                     C - G
                     A - T
                     G + T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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