The detailed information of tRNA gene sequence


Sequence ID>WENV170009401
Genome IDAPMI01000166
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 41799
End posion on genome 41874
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggacttcgag
tRNA gene sequence 
GAAAAAGTAGCTCAATCGGTAGAGCATCTGATTTGTAATCAGACGGTAGGGGGTTCGATT
CCCTCCTTTTTCTCCA
Downstream region at tRNA end position 
tggtaagcct
Secondary structure (Cloverleaf model)
>WENV170009401	Thr	TGT
                   g      TCCA tggtaagcct
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTA
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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