The detailed information of tRNA gene sequence


Sequence ID>WENV170009408
Genome IDAPMI01000186
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 340638
End posion on genome 340714
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgcgggac
tRNA gene sequence 
GGTCTTGTAGCTCAGACGGTTAGAGCATCTGACTCATAATCAGAGGGTCCCTGGTTCGAT
CCCAGGCGGGACCACCG
Downstream region at tRNA end position 
aataataaaa
Secondary structure (Cloverleaf model)
>WENV170009408	Met	CAT
                   c      ACCG aataataaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     T + G
                     G - C          C T
                    T     G G A C C     A
      A G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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