The detailed information of tRNA gene sequence


Sequence ID>WENV170009409
Genome IDAPMI01000186
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 429789
End posion on genome 429700
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctaccataat
tRNA gene sequence 
GGTGAGATGGGTGAGAGGCTGAAACCACCAGTTTGCTAAACTGACGTACGGGTTAAACTG
TACCGAGGGTTCGAATCCCTCTCTCACCGCgc
Downstream region at tRNA end position 
agagacagta
Secondary structure (Cloverleaf model)
>WENV170009409	Ser	GCT
                   t      GCgc agagacagta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTTAAACTGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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