The detailed information of tRNA gene sequence


Sequence ID>WENV170009412
Genome IDAPMI01000186
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 24230
End posion on genome 24155
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cactccacat
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCGAGT
CTTGCTCCCGCAACTA
Downstream region at tRNA end position 
aagaaaagcc
Secondary structure (Cloverleaf model)
>WENV170009412	Met	CAT
                   t      ACTA aagaaaagcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C G T T C     A
      T G A        G      | | | | |     G
    T       C G A G       G C A A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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