The detailed information of tRNA gene sequence


Sequence ID>WENV170009417
Genome IDAPMI01000194
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 241243
End posion on genome 241319
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ccgcgtcaac
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGTAGCGCCCTCCGAAGGCGTTGGTCGGACGTTCGAA
TCGTCTCGGGTGCGCCA
Downstream region at tRNA end position 
cgtcactcac
Secondary structure (Cloverleaf model)
>WENV170009417	Arg	CCG
                   c      GCCA cgtcactcac
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C T G C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A C G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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