The detailed information of tRNA gene sequence


Sequence ID>WENV170009422
Genome IDAPMI01000203
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2512
End posion on genome 2439
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cttccagtag
tRNA gene sequence 
GCCCTCGTAGCATGAAGGTCGTGCAGTTGCCTTGTAAGCATCAGGTCTTGGTTCGATTCC
GAGCGGGGGCACCA
Downstream region at tRNA end position 
gtcgcttcgc
Secondary structure (Cloverleaf model)
>WENV170009422	Thr	TGT
                   g      ACCA gtcgcttcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T T
                    T     G A G C C     A
        A G        A      | | + | |     G
      A     T A C G       C T T G G     C
      G     + | | |                 T T
      G     G T G C
        T C        A     AGGT
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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