The detailed information of tRNA gene sequence


Sequence ID>WENV170009426
Genome IDAPMI01000222
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 327513
End posion on genome 327427
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaaacaatt
tRNA gene sequence 
GGAGCGTTGACCGAAACGGTAAGGTACTGGTATGCTAAACCAAGGTTGGGGTAACACCCA
AGTAAGTTCGATTCTTACACGCTCCGCtt
Downstream region at tRNA end position 
acaccctctc
Secondary structure (Cloverleaf model)
>WENV170009426	Ser	GCT
                   t      GCtt acaccctctc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     C A T T C     A
      A A A        G      | | | | |     G
    C       G C C A       G T A A G     C
    G         | | |                 T T
    G       A G G T
      T A          A     GGTTGGGGTAACACCCAA
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  A       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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