The detailed information of tRNA gene sequence


Sequence ID>WENV170009428
Genome IDAPMI01000226
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 52202
End posion on genome 52126
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttgaaaagt
tRNA gene sequence 
GGGTCTTTAGCTCAGTTGGTTAGAGCCGGCCGCTCATAACGGTCTGGTCGTTGGTTCGAG
TCCAACAAGACCCACCA
Downstream region at tRNA end position 
cattctcact
Secondary structure (Cloverleaf model)
>WENV170009428	Met	CAT
                   t      ACCA cattctcact
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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