The detailed information of tRNA gene sequence


Sequence ID>WENV170009445
Genome IDAPMI01000330
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 65725
End posion on genome 65629
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cagtgtttac
tRNA gene sequence 
GGAAGGGCGGCGTCATCCGGTGAGGCGGCCGGACTTCAAATCCGGTGGGGGCCGTCAGGC
GGTCCTTGGTGGGTTCGACTCCCACGCCCTTCCGCCA
Downstream region at tRNA end position 
ttttttggct
Secondary structure (Cloverleaf model)
>WENV170009445	SeC(p)	TCA
                   c      GCCA ttttttggct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T C
                    G     C A C C C     A
      C T A        G      | | | | |     G
    C       C T G C       G T G G G     C
    G       | + | |                 T T
    G       G G C G
      T G A        G     TGGGGGCCGTCAGGCGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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