The detailed information of tRNA gene sequence


Sequence ID>WENV170009446
Genome IDAPMI01000330
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 9885
End posion on genome 9809
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctttctcaga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
tactcaggga
Secondary structure (Cloverleaf model)
>WENV170009446	Met	CAT
                   a      ACCA tactcaggga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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