The detailed information of tRNA gene sequence


Sequence ID>WENV170009457
Genome IDAPMI01000362
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5885
End posion on genome 5961
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
actacgggac
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGCTAGAGCATCTCGTTTACACCGAGAGGGTCGGGGGTTCGAG
CCCCTCAGCGCCCACCA
Downstream region at tRNA end position 
aaagaaatac
Secondary structure (Cloverleaf model)
>WENV170009457	Val	TAC
                   c      ACCA aaagaaatac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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