The detailed information of tRNA gene sequence


Sequence ID>WENV170009463
Genome IDAPMI01000363
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3582
End posion on genome 3505
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatgcagcat
tRNA gene sequence 
GCGCTCGTAGTGAAGTTGGCCTATCACGCCTCCCTGTCACGGAGGAGATCGCCGGTTCGA
ATCCGGTCGAGCGCGCCA
Downstream region at tRNA end position 
tagaaaaacg
Secondary structure (Cloverleaf model)
>WENV170009463	Asp	GTC
                   t      GCCA tagaaaaacg
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G G C C     A
    T T G A        A      + | | | |     G
  G         A G T G       G C C G G     C
  G         | | | |                 T T
  C         T C A C
    C T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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