The detailed information of tRNA gene sequence


Sequence ID>WENV170009471
Genome IDAPMI01000376
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 268160
End posion on genome 268236
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggccctcct
tRNA gene sequence 
CGGGGTGTAGCTCAGTCCGGTAGAGTGTCTGCTTTGGGAGCAGAAAGTCGCACGTTCGAA
TCGTGTCACCCCGACCA
Downstream region at tRNA end position 
ctcattagtc
Secondary structure (Cloverleaf model)
>WENV170009471	Pro	TGG
                   t      ACCA ctcattagtc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T G C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A C G     C
    C       | | | +                 T T
    G       G A G T
      G T A        G     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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