The detailed information of tRNA gene sequence


Sequence ID>WENV170009529
Genome IDAPMI01000561
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 7427
End posion on genome 7354
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gctttttttt
tRNA gene sequence 
ACGGGCATAGTTCAACGGTAGAATAGAGGTCTCCAAAACCTTAGATCGTGGTTCGAATCC
GCGTGCCCGTGCTA
Downstream region at tRNA end position 
acattgcctt
Secondary structure (Cloverleaf model)
>WENV170009529	Trp	CCA
                   t      GCTA acattgcctt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G C G C C     A
        A A        A      | | + | |     G
      C     C T T G       C G T G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     AGAT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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