The detailed information of tRNA gene sequence


Sequence ID>WENV170009535
Genome IDAPMI01000586
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 410117
End posion on genome 410194
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
caatcacaac
tRNA gene sequence 
GGGAGCTTAGCTCAGCTGGTTCAGAGCATCTGCCTTACAAGCAGAGGGTCACAGGTTCGA
ACCCTGTAGCTCCCACTA
Downstream region at tRNA end position 
aaacgcctcg
Secondary structure (Cloverleaf model)
>WENV170009535	Val	TAC
                   c      ACTA aaacgcctcg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A          C A
                    T     T G T C C     A
    T C G A        A      | | | | |     G
  G         C T C G       A C A G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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