The detailed information of tRNA gene sequence


Sequence ID>WENV170009539
Genome IDAPMI01000614
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 6479
End posion on genome 6386
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgacgttact
tRNA gene sequence 
GGAGACGTCGCATAGTTCGGCCTAGTGCACCACCCTGCTAAGGTGGAGAGGGGTTTAAAC
TCCTCCGTGGGTTCAAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
aatcagtcag
Secondary structure (Cloverleaf model)
>WENV170009539	Ser	GCT
                   t      GCCA aatcagtcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     A
  C         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        A     AGAGGGGTTTAAACTCCTCC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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