The detailed information of tRNA gene sequence


Sequence ID>WENV170009555
Genome IDAPMI01000729
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5533
End posion on genome 5457
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatcatcac
tRNA gene sequence 
GGCACCGTAGCTCAGCTGGTTAGAGCGCAGGACTCATAAGCCTGAGGTCACAGGATCATT
CCCTGTCGGTGCTACCA
Downstream region at tRNA end position 
agacaaaacg
Secondary structure (Cloverleaf model)
>WENV170009555	Met	CAT
                   c      ACCA agacaaaacg
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          C T
                    T     T G T C C     T
      C G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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