The detailed information of tRNA gene sequence


Sequence ID>WENV170009572
Genome IDAPMI01000753
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 693303
End posion on genome 693228
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
catcagcgat
tRNA gene sequence 
GGTACCATAGCACAACGGCCAGTGTGCCTCACTGTCTATGAGGAAGGTGTGGGTTCGACT
CCCATTGGTACCGCGA
Downstream region at tRNA end position 
tctgggaaca
Secondary structure (Cloverleaf model)
>WENV170009572	Asp	GTC
                   t      GCGA tctgggaaca
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     A - T          T C
                    T     T A C C C     A
      C A A        A      + | | | |     G
    G       C A C G       G T G G G     C
    G       | | | +                 T T
    C       G T G T
      C A          G     AAGGT
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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