The detailed information of tRNA gene sequence


Sequence ID>WENV170009612
Genome IDAPMI01000890
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1316
End posion on genome 1392
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aattagttac
tRNA gene sequence 
GGGCCAGTAGCTCAGCTGGTTAGAGCACCTGCCTCTTAAGCAGGGTGTCGAGAGTTCAAG
TCTCTCCTGGCCCTCCA
Downstream region at tRNA end position 
agtgtcaaat
Secondary structure (Cloverleaf model)
>WENV170009612	Lys	CTT
                   c      TCCA agtgtcaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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