The detailed information of tRNA gene sequence


Sequence ID>WENV170009642
Genome IDAPMI01001116
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3035
End posion on genome 2948
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtcacccac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTGATGGTACTGGTCTTGAAAACCAGCGTGGGGCAACTCACC
GCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tgcaatgcga
Secondary structure (Cloverleaf model)
>WENV170009642	Ser	TGA
                   c      GCCA tgcaatgcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G       + | | |                 T T
    T       T G G T
      T G A        A     CGTGGGGCAACTCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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