The detailed information of tRNA gene sequence


Sequence ID>WENV170009643
Genome IDAPMI01001139
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 41642
End posion on genome 41718
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaacctaggt
tRNA gene sequence 
CGGGCTGTAGTTCAGCCTGGTAGAACGCTTGCATGGGGTGCAAGAGGTCGTGAGTTCGAA
TCTCGCCAGCCCGACCA
Downstream region at tRNA end position 
cggttaactg
Secondary structure (Cloverleaf model)
>WENV170009643	Pro	GGG
                   t      ACCA cggttaactg
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     G
    C       C T T G       G T G A G     C
    T       | | | |                 T T
    G       G A A C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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