The detailed information of tRNA gene sequence


Sequence ID>WENV170009645
Genome IDAPMI01001154
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3109
End posion on genome 3185
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ctttcctaaa
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGTCGGCCTCCGGAGCCGAAGGTCGTGAGTTCAAG
TCTCGCCGGGCGCGCCA
Downstream region at tRNA end position 
atcctcgctt
Secondary structure (Cloverleaf model)
>WENV170009645	Arg	CCG
                   a      GCCA atcctcgctt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T G A        A      | + | | |     A
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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