The detailed information of tRNA gene sequence


Sequence ID>WENV170009657
Genome IDAPMI01001299
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 53840
End posion on genome 53915
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cgcttagtat
tRNA gene sequence 
GCGGGAGTAGCTCAGCTGGTAGAGCGACAGCCTTCCAAGCTGTAGGTCGCGGGTTCGAAC
CTCGTCTCCCGCTCCA
Downstream region at tRNA end position 
gtagcaacgg
Secondary structure (Cloverleaf model)
>WENV170009657	Gly	TCC
                   t      TCCA gtagcaacgg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C A
                    T     T G C T C     A
      C G A        A      + | | + |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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