The detailed information of tRNA gene sequence


Sequence ID>WENV170009717
Genome IDAPMI01002227
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 18565
End posion on genome 18489
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctggcaaaat
tRNA gene sequence 
GGCTCCGTAGCTCAGCTGGATAGAGCATCCGCCTTCTAAGCGGACGGTCACTGGTTCGAA
TCCAGTCGGAGTCGCCA
Downstream region at tRNA end position 
ttcttttcaa
Secondary structure (Cloverleaf model)
>WENV170009717	Arg	TCT
                   t      GCCA ttcttttcaa
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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