The detailed information of tRNA gene sequence


Sequence ID>WENV170009754
Genome IDAPMI01002542
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2466
End posion on genome 2391
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aattcggtat
tRNA gene sequence 
AGGGGTGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
ccgaatagtt
Secondary structure (Cloverleaf model)
>WENV170009754	Trp	CCA
                   t      GCCA ccgaatagtt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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