The detailed information of tRNA gene sequence


Sequence ID>WENV170009755
Genome IDAPMI01002543
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 68615
End posion on genome 68526
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caattttatt
tRNA gene sequence 
GGACAGGTGGCTGAGCGGCTGAAAGCACCGCACTCGAAATGCGGCATACTCGTAAGGGTA
TCGGGGGTTCAAATCCCCCTCTGTCCGCCA
Downstream region at tRNA end position 
ttaacaaaat
Secondary structure (Cloverleaf model)
>WENV170009755	Ser	CGA
                   t      GCCA ttaacaaaat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        A     CATACTCGTAAGGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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