The detailed information of tRNA gene sequence


Sequence ID>WENV170009767
Genome IDAPMI01002733
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 51084
End posion on genome 51008
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacgggttc
tRNA gene sequence 
GGATCCTTAGCTCAGACGGTTAGAGCATCTGACTCATAATCAGAGGGTCGCAGGTTCAAA
TCCTGCAGGATCCACGA
Downstream region at tRNA end position 
ctgatgccgg
Secondary structure (Cloverleaf model)
>WENV170009767	Met	CAT
                   c      ACGA ctgatgccgg
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     C G T C C     A
      A G A        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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