The detailed information of tRNA gene sequence


Sequence ID>WENV170009837
Genome IDAPMI01003757
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 10252
End posion on genome 10327
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aggctatttt
tRNA gene sequence 
CGGGATGTGGCGCAGTTGGTAGCGCGCGCCGCTGGGGGTGGCGAGGTCGCAAGTTCAAGT
CTTGTCATCCCGACCA
Downstream region at tRNA end position 
tcaagatttc
Secondary structure (Cloverleaf model)
>WENV170009837	Pro	GGG
                   t      ACCA tcaagatttc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G T T C     A
      T G A        G      + | | | |     A
    T       C G C G       G C A A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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