The detailed information of tRNA gene sequence


Sequence ID>WENV170009912
Genome IDAPMI01004866
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 11094
End posion on genome 11167
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaataactca
tRNA gene sequence 
GAGGGCGTAGCTCCAACGGTAGAGCGTTGGACTCCAAATCCAACGGTTGTGGGTTCAAAT
CCCATCGCCCTCACtt
Downstream region at tRNA end position 
tttacttttt
Secondary structure (Cloverleaf model)
>WENV170009912	Trp	CCA
                   a      ACtt tttacttttt
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A C C C     A
      A A C        A      + | | | |     A
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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