The detailed information of tRNA gene sequence


Sequence ID>WENV170009930
Genome IDAPMI01005338
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1347
End posion on genome 1273
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
caccattgtc
tRNA gene sequence 
GGCTGCATAGTTCAATGGATAGAATATCGGATTTCGGCTCCGAGGATGAGGGTTCGAATC
CTTCTGCGGCTACAA
Downstream region at tRNA end position 
aaaagtcaag
Secondary structure (Cloverleaf model)
>WENV170009930	Arg	TCG
                   c      ACAA aaaagtcaag
                     G + T
                     G - C
                     C - G
                     T + G
                     G - C
                     C - G
                     A - T          T A
                    T     C T T C C     A
      T A A        A      | | + | |     G
    G       C T T G       G A G G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     GGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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