The detailed information of tRNA gene sequence


Sequence ID>WENV170009980
Genome IDAPMI01006328
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4205
End posion on genome 4285
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttccagtgat
tRNA gene sequence 
GGCACTTTGGCAGAGCGGTAATTGCAATGGTTTGCTAAACCATGCCCTCAGGGTTCGTGG
GTTCGATCCCCACAGGTGCCTttt
Downstream region at tRNA end position 
ttaatttaca
Secondary structure (Cloverleaf model)
>WENV170009980	Ser	GCT
                   t      Tttt ttaatttaca
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          C T
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      A A          A     GCCCTCAGGGTTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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